Datasets
Single Cell RNA-seq Datasets
The following single-cell RNA-seq datasets are available in csv file format. Each dataset contains three csv files: data, cell metadata, and gene metadata. Download the zip file by clicking on the link and extracting.
| Dataset | Description | No. of Genes | No. of Cells | Download Link |
|---|---|---|---|---|
| Biase1 | Mouse embryo development | 25737 | 49 | Link |
| Yan2 | Human embryo development | 20214 | 90 | Link |
| Goolam3 | Mouse embryo development | 41480 | 124 | Link |
| Deng4 | Mouse embryo development | 41480 | 124 | Link |
| Pollen5 | Human tissue | 41480 | 124 | Link |
| Kolodziejczyk6 | Mouse embryonic stem cells | 41480 | 124 | Link |
References
- Biase, F.H., Cao, X. & Zhong, S. Genome Res. 24, 1787–1796 (2014)
- Yan, L. et al. Nat. Struct. Mol. Biol. 20, 1131–1139 (2013)
- Goolam, M. et al. Cell 165, 61–74 (2016)
- Deng, Q., Ramsköld, D., Reinius, B. & Sandberg, R. Science 343, 193–196 (2014)
- Pollen, A.A. et al. Nat. Biotechnol. 32, 1053–1058 (2014)
- Kolodziejczyk, A.A. et al. Cell Stem Cell 17, 471–485 (2015)